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Align REBASE::M.Gba708I to PF01170 (UPF0020)

REBASE::M.Gba708I has 528 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    6.1e-11   28.5   0.0    5.2e-10   25.4   0.0    2.3  2  REBASE::M.Gba708I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Gba708I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   5.2e-10   5.2e-10      17     134 ..     186     299 ..     183     307 .. 0.78
   2 ?   -0.9   0.0     0.061     0.061     147     180 ..     333     366 ..     329     381 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 5.2e-10
            UPF0020  17 AaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108
                         +a+v     ++ge+ +DP CG+G++l+ a   + +  p l          +a+++  +   l g +l   v + +  N+   g+g +    
  REBASE::M.Gba708I 186 IRAIVDCVAPRPGETVADPACGTGGFLLAAHDYVVRHHPSLD---------RAQKRHLKLEALHGTELVDGVARLCAMNLLLHGIGPTAGDT 268
                        589999999*******************99999888888665.........45555555555899999999999999999999988776555 PP

            UPF0020 109 qadaakLr.....lkegevdvivtnpPYGer 134
                        +a a  +       + + ++vi+tnpP+G++
  REBASE::M.Gba708I 269 AAPAVRVDdalraDPGQRFEVILTNPPFGRK 299
                        555544444333445569***********86 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.061
            UPF0020 147 eflrelkrvlrgggrlvlltaenkalekaleera 180
                        +f + +k  l+ ggr+++++++n  +e  ++e  
  REBASE::M.Gba708I 333 AFVQHVKTLLKIGGRAAVVVPDNVLFEGGAGETV 366
                        68899999***************99998887773 PP



Or compare REBASE::M.Gba708I to CDD or PaperBLAST