REBASE::M.Gba708I has 528 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.1e-11 28.5 0.0 5.2e-10 25.4 0.0 2.3 2 REBASE::M.Gba708I Domain annotation for each sequence (and alignments): >> REBASE::M.Gba708I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.4 0.0 5.2e-10 5.2e-10 17 134 .. 186 299 .. 183 307 .. 0.78 2 ? -0.9 0.0 0.061 0.061 147 180 .. 333 366 .. 329 381 .. 0.80 Alignments for each domain: == domain 1 score: 25.4 bits; conditional E-value: 5.2e-10 UPF0020 17 AaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108 +a+v ++ge+ +DP CG+G++l+ a + + p l +a+++ + l g +l v + + N+ g+g + REBASE::M.Gba708I 186 IRAIVDCVAPRPGETVADPACGTGGFLLAAHDYVVRHHPSLD---------RAQKRHLKLEALHGTELVDGVARLCAMNLLLHGIGPTAGDT 268 589999999*******************99999888888665.........45555555555899999999999999999999988776555 PP UPF0020 109 qadaakLr.....lkegevdvivtnpPYGer 134 +a a + + + ++vi+tnpP+G++ REBASE::M.Gba708I 269 AAPAVRVDdalraDPGQRFEVILTNPPFGRK 299 555544444333445569***********86 PP == domain 2 score: -0.9 bits; conditional E-value: 0.061 UPF0020 147 eflrelkrvlrgggrlvlltaenkalekaleera 180 +f + +k l+ ggr+++++++n +e ++e REBASE::M.Gba708I 333 AFVQHVKTLLKIGGRAAVVVPDNVLFEGGAGETV 366 68899999***************99998887773 PP
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