REBASE::M.Gel16401I has 496 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-12 32.7 0.0 1.9e-10 26.9 0.0 2.7 2 REBASE::M.Gel16401I Domain annotation for each sequence (and alignments): >> REBASE::M.Gel16401I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.9 0.0 1.9e-10 1.9e-10 18 136 .. 157 268 .. 153 274 .. 0.77 2 ! 2.5 0.0 0.0058 0.0058 147 191 .. 300 345 .. 293 350 .. 0.87 Alignments for each domain: == domain 1 score: 26.9 bits; conditional E-value: 1.9e-10 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvg.dlie 106 a+v + k+ge++ DP CG+G++l+ a + p ++++ e + ++ + g +l ++ + + N+ g+g d + REBASE::M.Gel16401I 157 QAIVDVIAPKPGETISDPACGTGGFLLAAHDSIVSKHPHMTKT---------ELKGLKQGTFKGWELVQATARLCAMNLMLHGIGsDDSD 237 689999999******************8877666666655522.........22233455699*******************99833455 PP UPF0020 107 fsqadaakLr.lkegevdvivtnpPYGerlg 136 + + +L + + +d+i+tnpP+G++ + REBASE::M.Gel16401I 238 LPLLVSDSLAaDPGDRFDIILTNPPFGKKSS 268 5555555666446669***********9865 PP == domain 2 score: 2.5 bits; conditional E-value: 0.0058 UPF0020 147 eflrelkrvlrgggrlvlltaenkalekaleer.alrkvkeknvkl 191 +f + +k l+++gr+++++++n +e ++e + + +e nv+ REBASE::M.Gel16401I 300 NFIQHVKTLLKQHGRAAVVVPDNVLFEGGAGETiRRKLLHECNVHT 345 588999*********************9999987777788888875 PP
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