REBASE::M.Hpy298VI has 545 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-10 25.3 0.0 1.8e-09 23.7 0.0 1.8 1 REBASE::M.Hpy298VI
Domain annotation for each sequence (and alignments):
>> REBASE::M.Hpy298VI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.7 0.0 1.8e-09 1.8e-09 78 140 .. 160 221 .. 132 243 .. 0.87
Alignments for each domain:
== domain 1 score: 23.7 bits; conditional E-value: 1.8e-09
UPF0020 78 klygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskka 140
++yg D d+ +++ +++ ++ d +++q+d+ +L+ + ++d i tnpP+G++ +++++
REBASE::M.Hpy298VI 160 NIYGYDTDAFAIALTKKRIKERYHLDCPNIVQKDFLNLK-HTPQFDCIFTNPPWGKKYNQNQK 221
49*************************************.8889************9988764 PP
Or compare REBASE::M.Hpy298VI to CDD or PaperBLAST