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Align REBASE::M.Hpy298VI to PF01170 (UPF0020)

REBASE::M.Hpy298VI has 545 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    5.9e-10   25.3   0.0    1.9e-09   23.7   0.0    1.8  1  REBASE::M.Hpy298VI  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Hpy298VI  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   1.9e-09   1.9e-09      78     140 ..     160     221 ..     132     244 .. 0.87

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.9e-09
                         -EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE----------HHH CS
             UPF0020  78 klygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskka 140
                         ++yg D d+ +++ +++  ++    d  +++q+d+ +L+  + ++d i tnpP+G++ +++++
  REBASE::M.Hpy298VI 160 NIYGYDTDAFAIALTKKRIKERYHLDCPNIVQKDFLNLK-HTPQFDCIFTNPPWGKKYNQNQK 221
                         49*************************************.8889************9988764 PP



Or compare REBASE::M.Hpy298VI to CDD or PaperBLAST