REBASE::M.Hpy57VII has 545 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-10 25.8 0.0 1.2e-09 24.2 0.0 1.8 1 REBASE::M.Hpy57VII
Domain annotation for each sequence (and alignments):
>> REBASE::M.Hpy57VII
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.2 0.0 1.2e-09 1.2e-09 78 143 .. 160 223 .. 132 250 .. 0.85
Alignments for each domain:
== domain 1 score: 24.2 bits; conditional E-value: 1.2e-09
UPF0020 78 klygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalek 143
++yg D d+ +++ +++ ++ d +++q+d+ +L+ + ++d i tnpP+G++ +++++ e+
REBASE::M.Hpy57VII 160 NIYGYDTDAFAIALTKKRIKERYHLDCPNIVQKDFLNLK-HTPQFDCIFTNPPWGKKYNQNQK-EN 223
49*************************************.8889*************988764.44 PP
Or compare REBASE::M.Hpy57VII to CDD or PaperBLAST