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Align REBASE::M.Kpnkp3I to PF01170 (UPF0020)

REBASE::M.Kpnkp3I has 717 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.3e-10   27.4   0.0    2.3e-10   26.6   0.0    1.3  1  REBASE::M.Kpnkp3I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Kpnkp3I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   2.3e-10   2.3e-10      29     134 ..     360     464 ..     352     489 .. 0.70

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 2.3e-10
                        TS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STT CS
            UPF0020  29 gepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lke 119
                        + ++ DP CGs ++   a  +  + +   ++      k+e  +++ ++  + g+D  +r+v  ar N    g  +   f++ +    + lk 
  REBASE::M.Kpnkp3I 360 DFRFCDPTCGSFGFGSVALSQIDKWI--DFKLVLADDKKESLKQKLRDCAFTGADAAPRMVMLARVNMALQGAPKAQIFYTDNSLTTNaLKP 449
                        45899*****9888654444444444..3444455555555555557788*****************9988877665555544433334566 PP

                        S---EEEE------- CS
            UPF0020 120 gevdvivtnpPYGer 134
                        +++d+i tnpP+G  
  REBASE::M.Kpnkp3I 450 NSFDLICTNPPFGTP 464
                        69***********75 PP



Or compare REBASE::M.Kpnkp3I to CDD or PaperBLAST