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Align REBASE::M.LveDOK28I to PF01170 (UPF0020)

REBASE::M.LveDOK28I has 782 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
    5.9e-10   25.3   0.1    3.5e-09   22.8   0.1    2.2  1  REBASE::M.LveDOK28I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.LveDOK28I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.1   3.5e-09   3.5e-09      31     141 ..     226     322 ..     220     325 .. 0.71

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 3.5e-09
                          -EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT.-GGGEEEEE--GGG--STT CS
              UPF0020  31 pllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekag.vgdliefsqadaakLrlke 119
                          +++DP CGsG++l Ea    ++   g++             +a  ++ lyg +++ +  + +++     g   + i + +   ++   + 
  REBASE::M.LveDOK28I 226 TIYDPACGSGGMLTEAQNFIKDEE-GAI-------------KAMGDVYLYGKEINDETYAICKSDMMIKGnNPENIRVGSTLSTDEF-AG 300
                          79*************976666655.444.............4456677899999999888888876544313455555544444333.34 PP

                          S---EEEE----------HHHH CS
              UPF0020 120 gevdvivtnpPYGerlgskkal 141
                          +++d +++npPYG++ +s+++ 
  REBASE::M.LveDOK28I 301 KSFDFMLSNPPYGKSWSSEQKY 322
                          49**************999875 PP



Or compare REBASE::M.LveDOK28I to CDD or PaperBLAST