REBASE::M.LveDOK28I has 782 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-10 25.4 0.1 2.8e-09 23.0 0.1 2.2 1 REBASE::M.LveDOK28I
Domain annotation for each sequence (and alignments):
>> REBASE::M.LveDOK28I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.0 0.1 2.8e-09 2.8e-09 31 141 .. 226 322 .. 220 325 .. 0.72
Alignments for each domain:
== domain 1 score: 23.0 bits; conditional E-value: 2.8e-09
UPF0020 31 pllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekag.vgdliefsqadaakLrlke 119
+++DP CGsG++l Ea ++ g++ +a ++ lyg +++ + + +++ g + i + + ++ +
REBASE::M.LveDOK28I 226 TIYDPACGSGGMLTEAQNFIKDEE-GAI-------------KAMGDVYLYGKEINDETYAICKSDMMIKGnNPENIRVGSTLSTDEF-AG 300
79*************976666655.444.............4456677999999999999998877644413455555554444333.34 PP
UPF0020 120 gevdvivtnpPYGerlgskkal 141
+++d +++npPYG++ +s+++
REBASE::M.LveDOK28I 301 KSFDFMLSNPPYGKSWSSEQKY 322
49**************999875 PP
Or compare REBASE::M.LveDOK28I to CDD or PaperBLAST