REBASE::M.Mfo1542I has 485 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-14 38.2 0.0 1e-13 37.5 0.0 1.3 1 REBASE::M.Mfo1542I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Mfo1542I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.5 0.0 1e-13 1e-13 20 149 .. 170 293 .. 164 346 .. 0.83
Alignments for each domain:
== domain 1 score: 37.5 bits; conditional E-value: 1e-13
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdl.iefsq 109
+v+++ k+++ + DP CG+ ++l+ a +++ + l + a+++ ++ + g D+d+ +++ + N g++ i +++
REBASE::M.Mfo1542I 170 MVKMTAPKPTDEICDPACGTAGFLVAASEYVRSTHE-------SVLTDAAQRKHFHNSMFHGYDFDSTMLRIGSMNMLMHGIESPdIRYRD 253
9************************77777766662.......2244445555558888***********************985499999 PP
UPF0020 110 adaakLrlkegevdvivtnpPYGerlgskkalekLYsefl 149
++ +++ +i++npP+ +l+ + + ++L + +
REBASE::M.Mfo1542I 254 SLSEGASEDAEKYTLILANPPFAGSLDYESTSKDLQRVVK 293
99999999999****************9999999987654 PP
Or compare REBASE::M.Mfo1542I to CDD or PaperBLAST