REBASE::M.MfoCT6III has 581 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-13 36.2 0.0 7.3e-11 28.2 0.0 2.9 2 REBASE::M.MfoCT6III Domain annotation for each sequence (and alignments): >> REBASE::M.MfoCT6III # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.2 0.0 7.3e-11 7.3e-11 16 133 .. 44 145 .. 37 163 .. 0.70 2 ! 3.9 0.0 0.0021 0.0021 14 38 .. 481 505 .. 478 506 .. 0.95 Alignments for each domain: == domain 1 score: 28.2 bits; conditional E-value: 7.3e-11 UPF0020 16 LAaalvrlagwkdgepl..lDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgd 103 LAa + ++a +++l lDP CG G +l ++ + p ++++l+g Dld++++q a + a + + REBASE::M.MfoCT6III 44 LAAQIRNRAHESTESTLrvLDPACGDGELLFAVHRVAVELLP------------------GVKVSLVGYDLDNEAIQVASQRAAEL--AI 113 666666666655444332278888888777544444444444..................35688**************9977655..55 PP UPF0020 104 liefsqadaakLr..lkegevdvivtnpPYGe 133 +++ q d+ + r ++g++d+++tnpPY + REBASE::M.MfoCT6III 114 PVDWHQGDFLQARrdIPQGSFDAVITNPPYVR 145 6777777777777668899***********65 PP == domain 2 score: 3.9 bits; conditional E-value: 0.0021 UPF0020 14 etLAaalvrlagwkdgepllDPmCG 38 e++A+ ++ +a+ k g +++D CG REBASE::M.MfoCT6III 481 EEIAYLMLAVANSKLGLRFYDEVCG 505 89**********************9 PP
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