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Align REBASE::M.Mmo172I to PF01170 (UPF0020)

REBASE::M.Mmo172I has 490 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    6.9e-13   34.8   0.0    1.5e-12   33.8   0.0    1.5  1  REBASE::M.Mmo172I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Mmo172I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   1.5e-12   1.5e-12      18     134 ..     172     279 ..     168     342 .. 0.74

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 1.5e-12
                        HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE CS
            UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsq 109
                        + +v++ + k ge+++DP CG+G++l  a   +++ +            ++ e ++  + +++g+++++     + +N    g++  ++++ 
  REBASE::M.Mmo172I 172 RFMVNRIDPKLGESIMDPACGTGGFLACAFDHVKEHY-----------VNTTEDHKILQKQICGVEKKQLPHLLCTTNMLLHGIEVPVQIRH 252
                        679***********************55544444444...........2333444446667*******999999999999999999999988 PP

                        --G..GG--STTS---EEEE------- CS
            UPF0020 110 ada..akLrlkegevdvivtnpPYGer 134
                         +   + L   ++++dvivtnpP+G  
  REBASE::M.Mmo172I 253 DNTlnKPLSSWDEQIDVIVTNPPFGGT 279
                        66511456677779***********54 PP



Or compare REBASE::M.Mmo172I to CDD or PaperBLAST