REBASE::M.MmoTt01I has 490 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.7e-13 35.4 0.0 9.7e-13 34.3 0.0 1.5 1 REBASE::M.MmoTt01I Domain annotation for each sequence (and alignments): >> REBASE::M.MmoTt01I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.3 0.0 9.7e-13 9.7e-13 18 134 .. 172 279 .. 168 342 .. 0.74 Alignments for each domain: == domain 1 score: 34.3 bits; conditional E-value: 9.7e-13 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108 + +v++ + k ge+++DP CG+G++l a +++ + ++ e ++ + +++g+++++ + +N g++ ++++ REBASE::M.MmoTt01I 172 RFMVNRIDPKLGESIMDPACGTGGFLACAFDHVKEHY-----------VNTTEDHKILQKQICGVEKKQLPHLLCTTNMLLHGIEVPVQIR 251 679***********************55544444444...........2333444446667*******99999999999999999999998 PP UPF0020 109 qada..akLrlkegevdvivtnpPYGer 134 + + L ++++dvivtnpP+G REBASE::M.MmoTt01I 252 HDNTlnKPLSSWDEQIDVIVTNPPFGGT 279 866511456677779***********54 PP
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