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Align REBASE::M.Mmu11497I to PF01170 (UPF0020)

REBASE::M.Mmu11497I has 469 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
    9.4e-15   40.9   0.0    1.9e-14   39.9   0.0    1.4  1  REBASE::M.Mmu11497I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Mmu11497I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.0   1.9e-14   1.9e-14      19     174 ..     153     309 ..     149     329 .. 0.84

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 1.9e-14
              UPF0020  19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108
                          ++vrl++ ++ge   DP CG+ ++ I a   +++         +++ +++ e++++ +  + g++l +   + a  Na    ++  i++ 
  REBASE::M.Mmu11497I 153 VMVRLTKPQPGELCNDPACGTFGFMIAAFDYVREHT------DKFFDLNQDEAHFEIQKAFTGVELVHDTHRLALMNAMLHSIEAPITLG 236
                          7*************************8777777777......455677788888888888****************************** PP

              UPF0020 109 qadaakLrlkegevdvivtnpPYGerlgskkal.ekLY.......seflrelkrvlrgggrlvlltaenkalek 174
                          +     L +  +++dv++tnpP+G + g ++a  ++L+        +fl+ + r l++ggr+++++++n  +++
  REBASE::M.Mmu11497I 237 D-TLSPLGKHLKNFDVVLTNPPFGTKKGGERATrDDLTfptsnkqLNFLQHIYRSLKSGGRAAVVLPDNVLFAD 309
                          *.67778866668**************99999988897433332236899999999999****99999988865 PP



Or compare REBASE::M.Mmu11497I to CDD or PaperBLAST