REBASE::M.Mpa1757I has 507 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9e-11 27.9 0.0 4e-10 25.8 0.0 2.0 1 REBASE::M.Mpa1757I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Mpa1757I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.8 0.0 4e-10 4e-10 18 141 .. 200 322 .. 196 354 .. 0.73
Alignments for each domain:
== domain 1 score: 25.8 bits; conditional E-value: 4e-10
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvg..dlie 106
+a+v+ + ge+++DP CG+G++l a+ ++i +f + + e+ + +yg ++ + + a N+ g++ +l++
REBASE::M.Mpa1757I 200 RAMVKAIAPQVGETIYDPCCGTGGFL---AQSYEYIR-----DFLADDITPEQLETIKLKTFYGREKENLIYPIALANLVLHGIDypHLWH 282
79***********************9...55555555.....3333322222222223444*****************9999987225566 PP
UPF0020 107 fsqadaakLr.....lkegevdvivtnpPYGerlgskkal 141
++++ + + ++d+i+tnpP+G + +++ +
REBASE::M.Mpa1757I 283 GNTLNREVIYgdlfqDAPPQFDIILTNPPFGGKEHRTVQA 322
66666655556654433339***********876666555 PP
Or compare REBASE::M.Mpa1757I to CDD or PaperBLAST