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Align REBASE::M.Msp1I to PF01170 (UPF0020)

REBASE::M.Msp1I has 687 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-11   28.9   0.0    1.7e-10   27.1   0.0    1.9  1  REBASE::M.Msp1I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Msp1I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   1.7e-10   1.7e-10      29     131 ..     198     287 ..     187     290 .. 0.86

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 1.7e-10
                      TS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS-- CS
          UPF0020  29 gepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegev 122
                      g + +DP CGsG++ +  a   ++               e+ + +  ++ +yg ++ r+ v+ a+ N+   g+ ++i++ +    + +++ g++
  REBASE::M.Msp1I 198 GGKVYDPACGSGGMFVQSAEFINEHRK------------EL-QGTASDVYVYGQEKTRETVNLAKMNLAVNGLRGEIKQANTYYEDPHKSFGSF 278
                      56789***********99987777762............22.23446677******************************************** PP

                      -EEEE---- CS
          UPF0020 123 dvivtnpPY 131
                      d +++npP+
  REBASE::M.Msp1I 279 DYVLANPPF 287
                      ********9 PP



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