REBASE::M.Mte10856I has 526 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-14 40.6 0.0 2e-14 39.9 0.0 1.3 1 REBASE::M.Mte10856I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Mte10856I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 39.9 0.0 2e-14 2e-14 18 172 .. 209 366 .. 204 390 .. 0.77
Alignments for each domain:
== domain 1 score: 39.9 bits; conditional E-value: 2e-14
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelk.lygsDldrrvvqgareNaekagvgdl.i 105
a+v + ++g+ + DP CG+ ++l+ a +++ pg l ++ae++++ +++ + g D+d+ +++ + N gv+ i
REBASE::M.Mte10856I 209 KAMVAMMAPRPGDEICDPACGTAGFLVAASEYVRDQHPGVL--------TNAEQRQHFHASmFHGYDFDATMLRIGSMNMLLHGVESPdI 290
79***************************999999999766........7888888855556***********************98549 PP
UPF0020 106 efsqadaakLrlkegevdvivtnpPYGerlgskkalekLYse.........flrelkrvlrgggrlvlltaenkal 172
+++ ++ +++ +i++npP+ +l+ + + ++L + fl + + l+ ggr+++++++ +
REBASE::M.Mte10856I 291 RYRDSLSEGASEDAEKYTLILANPPFAGSLDYESTSKDLQRMvktkktellFLALFLKLLKPGGRAAVIVPDGVLF 366
999999999999999***************9999888887651112222224444555556666666666555555 PP
Or compare REBASE::M.Mte10856I to CDD or PaperBLAST