REBASE::M.Nbr352I has 590 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.6e-12 33.7 0.1 1.9e-11 30.2 0.0 2.6 2 REBASE::M.Nbr352I Domain annotation for each sequence (and alignments): >> REBASE::M.Nbr352I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.2 0.0 1.9e-11 1.9e-11 69 143 .. 63 138 .. 16 147 .. 0.78 2 ? -0.4 0.0 0.042 0.042 14 38 .. 505 529 .. 502 530 .. 0.95 Alignments for each domain: == domain 1 score: 30.2 bits; conditional E-value: 1.9e-11 UPF0020 69 aeeear...aelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalek 143 a e r ++++l+g Dld+++++ ar a +ag++ +++ + + +l+ ++d+++tnpPY + + +a + REBASE::M.Nbr352I 63 AAE--RlpgTRIELIGYDLDPAALRVARARAGAAGIAVDWQVGDFLTVAAELAAVSFDAVITNPPYVRTQQLGGATAQ 138 222..13357899***********************9888888777666667777***********887776666644 PP == domain 2 score: -0.4 bits; conditional E-value: 0.042 UPF0020 14 etLAaalvrlagwkdgepllDPmCG 38 e+LA+ l+ +a+ g +++D CG REBASE::M.Nbr352I 505 EQLAYLLMGVANSALGLRFYDTVCG 529 79**********************9 PP
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