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Align REBASE::M.Nsp209I to PF01170 (UPF0020)

REBASE::M.Nsp209I has 611 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
      4e-11   29.1   0.1    3.5e-10   26.0   0.0    2.3  2  REBASE::M.Nsp209I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Nsp209I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   3.5e-10   3.5e-10       4     134 ..      31     140 ..      28     156 .. 0.80
   2 ?   -3.4   0.0      0.37      0.37      16      38 ..     528     550 ..     526     551 .. 0.87

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 3.5e-10
                        S-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHH CS
            UPF0020   4 RefngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareN 95 
                        R+++ p  L   LA  l++     ++ ++lDP CG G +l+     +a++ pgl                   ++  g Dld+++v+ are 
  REBASE::M.Nsp209I  31 RHYT-PDRLARFLADRLLEHLTPGDTLRILDPACGDGELLLALRDAAAQRFPGLP------------------VRATGHDLDPAAVRVARER 103
                        5665.6678888999999999999999************9866666666666655..................4578*************96 PP

                        HHHTT-GGGEEEEE--GGG--STTS---EEEE------- CS
            UPF0020  96 aekagvgdliefsqadaakLrlkegevdvivtnpPYGer 134
                        a  ag++ ++ + +   a+ +l++g++dv++tnpPY + 
  REBASE::M.Nsp209I 104 A--AGLDVTWRVGDFLCAAEELADGQFDVVITNPPYVRT 140
                        5..8888888888888777778899***********654 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.37
                        HHHHHHHHTT--TTS-EEETT-T CS
            UPF0020  16 LAaalvrlagwkpgepllDPmCG 38 
                        L + l+ +a+   g +++D  CG
  REBASE::M.Nsp209I 528 LGYLLMGVANSAVGLRFYDAVCG 550
                        677788899999**********9 PP



Or compare REBASE::M.Nsp209I to CDD or PaperBLAST