REBASE::M.Pae63III has 796 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.4e-10 26.1 0.0 1.9e-09 23.6 0.0 2.2 2 REBASE::M.Pae63III Domain annotation for each sequence (and alignments): >> REBASE::M.Pae63III # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.6 0.0 1.9e-09 1.9e-09 31 140 .. 226 321 .. 222 325 .. 0.84 2 ? -1.5 0.0 0.092 0.092 87 119 .. 731 765 .. 728 773 .. 0.74 Alignments for each domain: == domain 1 score: 23.6 bits; conditional E-value: 1.9e-09 UPF0020 31 pllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkeg 120 +++DP CGsG++l E ++ +p + ++++++lyg +++ + + +++ + +d +++ ++ + + REBASE::M.Pae63III 226 TIYDPACGSGGMLTESQNFIEEKYPA--------------QGIQRDIHLYGKEINDETYAICKSDMM-IKGNDPAHIRPGSTLSVDeFAGS 301 79*************99988888873..............45789999**************99875.55678889998888888843344 PP UPF0020 121 evdvivtnpPYGerlgskka 140 +d +++npPYG++ s+++ REBASE::M.Pae63III 302 RFDFMLSNPPYGKSWASEQK 321 8*************999886 PP == domain 2 score: -1.5 bits; conditional E-value: 0.092 UPF0020 87 rvvqgareNaekagvgdliefsqa..daakLrlke 119 +v+ a N+e+ ++g +i+f++ +++ Lr +e REBASE::M.Pae63III 731 PHVEEAWINLESVKIGYEISFNKYfyKHQPLRSME 765 58999***************998522566666444 PP
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