REBASE::M.Pde1525I has 670 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.5e-11 28.4 0.0 2.6e-10 26.5 0.0 2.0 1 REBASE::M.Pde1525I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Pde1525I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.5 0.0 2.6e-10 2.6e-10 20 138 .. 342 470 .. 336 484 .. 0.72
Alignments for each domain:
== domain 1 score: 26.5 bits; conditional E-value: 2.6e-10
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNa..ekagvgdlie.. 106
+v g++++ ++lD CGsG++l+ a +++ a + ++ + + + ++ ae +lyg+++++++ + a+ N + g +++++
REBASE::M.Pde1525I 342 IVHSIGIEKDWKILDTSCGSGGFLLHALKAVRDEADNIYENERGSVSWREYWHEFAEKHLYGIEINEQISRVAKMNMiiHDDGHTNIVTnd 432
67777999999****************99999999666655555544444444446777***************99633222333333211 PP
UPF0020 107 ......fsqadaakLrlkegevdvivtnpPYGerlgsk 138
+ + ++++L+ ++g +d+i tnpP+G ++++
REBASE::M.Pde1525I 433 glknnrAIEVENRNLNFQDGTFDLIMTNPPFGSKIKAD 470
11111134456677778899*************99875 PP
Or compare REBASE::M.Pde1525I to CDD or PaperBLAST