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Align REBASE::M.Pfl300I to PF01170 (UPF0020)

REBASE::M.Pfl300I has 471 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.2e-12   34.1   0.0      6e-12   31.8   0.0    2.0  2  REBASE::M.Pfl300I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Pfl300I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0     6e-12     6e-12      18     143 ..     153     264 ..     149     322 .. 0.78
   2 ?   -1.1   0.0     0.071     0.071     127     150 ..     386     409 ..     366     418 .. 0.73

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 6e-12
                        HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHH.HH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEE CS
            UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeear.aelklygsDldrrvvqgareNaekagvgdliefs 108
                         ++vrl++ k ge ++DP  GsG++l+ a     ++a+              +++ + +  k  g++++++  + +  N    g++ +i + 
  REBASE::M.Pfl300I 153 EVIVRLTQPKIGELIQDPSIGSGGFLVAA-DEFIRRAA-------------TKKQYKaNPPKYQGVEIEKNTRRICLMNTFLHGLDAQIIYG 230
                        679************************55.55555552.............2333332334478**************************** PP

                        E--GGG--STTS---EEEE----------HHHHHH CS
            UPF0020 109 qadaakLrlkegevdvivtnpPYGerlgskkalek 143
                        +a   +  + e   d+i++npP+G + gsk++l+k
  REBASE::M.Pfl300I 231 DALTDDASALE-AADLILANPPFGSKAGSKRSLRK 264
                        *9999999666.79*****************9953 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.071
                        E----------HHHHHHHHHHHHH CS
            UPF0020 127 tnpPYGerlgskkalekLYseflr 150
                        ++ PYG++  + + ++  ++ f r
  REBASE::M.Pfl300I 386 GDDPYGKSSRKDQGVNGCFRRFTR 409
                        699****99998888777777765 PP



Or compare REBASE::M.Pfl300I to CDD or PaperBLAST