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Align REBASE::M.PfrAS1I to PF01170 (UPF0020)

REBASE::M.PfrAS1I has 489 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    4.6e-10   25.6   0.0    1.1e-09   24.3   0.0    1.6  1  REBASE::M.PfrAS1I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.PfrAS1I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   1.1e-09   1.1e-09      20     132 ..     174     279 ..     170     296 .. 0.79

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 1.1e-09
                        HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE-- CS
            UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqad 111
                        +vr+ + k +e+ +DP CG+G++l   ++++ ++             ++ae e   +++++g+++++     a +N    g++   +++  +
  REBASE::M.PfrAS1I 174 MVRMVDPKLDEKVMDPACGTGGFL--TCTIEHKRSR---------YVKTAEDERTLQASIFGVEKKPLPHLLATTNMILHGIEVPSQIRHDN 254
                        9***********************..5777777762.........23456666667788*******98777888888777777777777644 PP

                        GGG--....STTS---EEEE----- CS
            UPF0020 112 aakLr....lkegevdvivtnpPYG 132
                            +     +++ v  iv+npP+G
  REBASE::M.PfrAS1I 255 TLRKPliswGPSERVHCIVANPPFG 279
                        43333448878889**********9 PP



Or compare REBASE::M.PfrAS1I to CDD or PaperBLAST