REBASE::M.PfrAS1I has 489 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-10 25.9 0.0 9.2e-10 24.6 0.0 1.6 1 REBASE::M.PfrAS1I
Domain annotation for each sequence (and alignments):
>> REBASE::M.PfrAS1I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.6 0.0 9.2e-10 9.2e-10 20 132 .. 174 279 .. 170 297 .. 0.79
Alignments for each domain:
== domain 1 score: 24.6 bits; conditional E-value: 9.2e-10
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqad 111
+vr+ + k +e+ +DP CG+G++l ++++ ++ ++ae e +++++g+++++ a +N g++ +++ +
REBASE::M.PfrAS1I 174 MVRMVDPKLDEKVMDPACGTGGFLT--CTIEHKRSR---------YVKTAEDERTLQASIFGVEKKPLPHLLATTNMILHGIEVPSQIRHDN 254
9***********************5..777777662.........23456666667888*******98877888888777777777777644 PP
UPF0020 112 aakLr....lkegevdvivtnpPYG 132
+ +++ v iv+npP+G
REBASE::M.PfrAS1I 255 TLRKPliswGPSERVHCIVANPPFG 279
43333448878889**********9 PP
Or compare REBASE::M.PfrAS1I to CDD or PaperBLAST