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Align REBASE::M.Pno11628I to PF01170 (UPF0020)

REBASE::M.Pno11628I has 481 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
      6e-11   28.5   0.1    3.5e-10   26.0   0.1    2.1  1  REBASE::M.Pno11628I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Pno11628I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.1   3.5e-10   3.5e-10      16     137 ..     167     280 ..     164     334 .. 0.82

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 3.5e-10
                          HHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--..EEEEES-HHHHHHHHHHHHHTT-GG CS
              UPF0020  16 LAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelk..lygsDldrrvvqgareNaekagvgd 103
                          + a +v + + + ge++lDP CG+G++l       ++ +             +   ++r+ l+  l++++l++     + +N    gv+d
  REBASE::M.Pno11628I 167 ITAFMVGRINPQLGETILDPSCGTGGFLTCSIRHMRRFV-------------KTPDDERT-LQagLRAVELKQLPHMLCVTNMLLHGVED 242
                          6677999999*****************953333333333.............23334443.3336********99999************ PP

                          GEEEEE--GGG--....STTS---EEEE---------- CS
              UPF0020 104 liefsqadaakLr....lkegevdvivtnpPYGerlgs 137
                             +   +a + +     +++evdvi++npP+G  +++
  REBASE::M.Pno11628I 243 PGFVIHGNALARPyesyTRRDEVDVILSNPPFGGQIEE 280
                          999999988877777887888************99987 PP



Or compare REBASE::M.Pno11628I to CDD or PaperBLAST