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Align REBASE::M.PpuAA7I to PF01170 (UPF0020)

REBASE::M.PpuAA7I has 552 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    7.5e-10   24.9   0.0    1.4e-09   24.1   0.0    1.4  1  REBASE::M.PpuAA7I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.PpuAA7I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   1.4e-09   1.4e-09      20     174 ..     198     357 ..     193     373 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 1.4e-09
                        HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE-- CS
            UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqad 111
                        ++r  + +pge+++DP  G+ ++lI a    ++       +  ++ ++e  ++++++  ++g++l +   + a  N    g+++  e ++  
  REBASE::M.PpuAA7I 198 IIRCIKPQPGETIQDPAAGTAGFLIAADAYIKSQT-----DDHYN-LDEKARSFQRNRAFVGVELVPGTRRLALMNTLLHGMEGDEEGVVHL 283
                        66777899*****************8855444444.....23333.4444444556666***********************9999988888 PP

                        GGG--...STTS.---EEEE----------HHHH.HHHHH.......HHHHHHHHH-TT..-EEEEEESSHHHHH CS
            UPF0020 112 aakLr...lkeg.evdvivtnpPYGerlgskkal.ekLYs.......eflrelkrvlrgggrlvlltsenkalek 174
                          +L    ++   +vdvi++npP+G + g  +   ++L+        +fl+ + r l+ ggr+++++++n  +e+
  REBASE::M.PpuAA7I 284 GNALGqtgAN-LpKVDVILSNPPFGTAKGGGGPTrDDLTYrtsnkqlAFLQHIYRGLKPGGRAAVVLPDNVLFEA 357
                        8888754433.259***********99887665547774313333335888888999999999999999888876 PP



Or compare REBASE::M.PpuAA7I to CDD or PaperBLAST