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Align REBASE::M.PspAT13I to PF01170 (UPF0020)

REBASE::M.PspAT13I has 477 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    2.4e-15   42.9   0.0    5.3e-15   41.7   0.0    1.5  1  REBASE::M.PspAT13I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.PspAT13I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0   5.3e-15   5.3e-15      18     187 ..     160     328 ..     156     336 .. 0.75

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 5.3e-15
             UPF0020  18 aalvrlagwkdgepllDPmCGsGtilIEaa.llganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdl.ie 106
                          a+v     + ge+  DP CG+G++l+ a   ++ + a   +         + ++++ ++  l g+D+ + vv+ a  N+   gvg     
  REBASE::M.PspAT13I 160 KAMVDCIAPQMGETVCDPACGTGGFLLTAYdYMKDQSA---N---------KEKRDFLRNKALHGVDNTPLVVTLASMNLYLHGVGTDrSP 238
                         699999*********************99724555555...2.........2233333555699*********************865055 PP

             UPF0020 107 fsqadaakLr.lkegevdvivtnpPYGerlgskkal..ekLYse.......flrelkrvlrgggrlvlltaenkalekaleer.alrkvke 186
                         +++ d    + +++  vdvi++npP+G r     ++   ++Y e       fl+ +  +l++ggr+++++++n  +e+ ++e  + r  + 
  REBASE::M.PspAT13I 239 IVCEDSL--EkEPSTLVDVILANPPFGTRPAGSVDInrPDFYVEtknnqlnFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETiRKRLLQD 327
                         6665555..4458889************965555543678997533344448999999999***********9999988877655555555 PP

             UPF0020 187 k 187
                         +
  REBASE::M.PspAT13I 328 F 328
                         5 PP



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