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Align REBASE::M.PspR2A2I to PF01170 (UPF0020)

REBASE::M.PspR2A2I has 488 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
      6e-12   31.8   0.0    1.4e-11   30.5   0.0    1.5  1  REBASE::M.PspR2A2I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.PspR2A2I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   1.4e-11   1.4e-11      20     132 ..     174     279 ..     170     289 .. 0.78

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 1.4e-11
                         HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-H..HHHHHHHHHHHHTT-GGGEEEE CS
             UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldr..rvvqgareNaekagvgdliefs 108
                         +vr+ + k +e+ +DP CG+G++l   ++++ ++             ++ae e   ++++yg+++++   ++++++  ++  +v ++i   
  REBASE::M.PspR2A2I 174 MVRMVDPKLDEKVMDPACGTGGFL--TCTIEHKRSR---------YVKTAEDERTLQASIYGVEKKPlpHLLATTNMILHGIEVPNQIRHD 253
                         9***********************..5777777762.........23456666667788******97224555555556666677777777 PP

                         E--GGG--..STTS---EEEE----- CS
             UPF0020 109 qadaakLr..lkegevdvivtnpPYG 132
                         +  a+ L    +++ vd iv+npP+G
  REBASE::M.PspR2A2I 254 NTLARPLIswGPKERVDCIVANPPFG 279
                         888888888878889**********9 PP



Or compare REBASE::M.PspR2A2I to CDD or PaperBLAST