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Align REBASE::M.Pst87II to PF01170 (UPF0020)

REBASE::M.Pst87II has 490 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    5.8e-14   38.4   0.0    1.1e-13   37.4   0.0    1.5  1  REBASE::M.Pst87II  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Pst87II  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.0   1.1e-13   1.1e-13      18     134 ..     172     279 ..     168     340 .. 0.76

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 1.1e-13
                        HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE CS
            UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsq 109
                        + +v++ + k ge+++DP CG+G++l  a+      ++           ++ e ++  +++++g+++++     + +N    g++  ++++ 
  REBASE::M.Pst87II 172 RFMVNRIDPKLGESIMDPACGTGGFL--ACAFDHVKVH---------YVNTTEDHKTLQQQIFGVEKKQLPHLLCTTNMLLHGIEVPVQIRH 252
                        679**********************9..3433333332.........23566666667888*******999999999999999999999888 PP

                        --G..GG--STTS---EEEE------- CS
            UPF0020 110 ada..akLrlkegevdvivtnpPYGer 134
                         +   + L + ++++dvi+tnpP+G  
  REBASE::M.Pst87II 253 DNTlnKPLSAWDEQFDVIITNPPFGGT 279
                        66511556688889***********54 PP



Or compare REBASE::M.Pst87II to CDD or PaperBLAST