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Align REBASE::M.PstRCH2I to PF01170 (UPF0020)

REBASE::M.PstRCH2I has 554 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    4.2e-17   48.6   0.0      7e-17   47.9   0.0    1.3  1  REBASE::M.PstRCH2I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.PstRCH2I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0     7e-17     7e-17      20     165 ..     201     365 ..     196     392 .. 0.78

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 7e-17
                         HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SS............HHHHHHHHHHHH--..EEEEES-HHHHHHHHHHH CS
             UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvle............lkaeaeeearaelk..lygsDldrrvvqgareNa 96 
                         + +l + + g++++DP CG+G++l+ a +   +  +++   +  +            + a + e+a+a l+  lyg D+d+ +v+ +  N+
  REBASE::M.PstRCH2I 201 MAELVQPQLGHKIADPACGTGGFLLGAYQYIVTQLAIKAGAK--NlapdedgfvrtsVAAALTEKAQAILQesLYGYDIDATMVRLGLMNL 289
                         677888999*****************9988777775555444..24489999987776666666666666678****************** PP

                         HHTT-GG.GEEEEE--GGG--STTS---EEEE----------HHHHHHHHHH.......HHHHHHHH-TT..-EEEE CS
             UPF0020  97 ekagvgd.liefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYse.......flrelkrvlrgggrlvll 165
                            g+++  i++++   ++   +e+e+d++++npP+  ++++   +e+L  +       f + + r l++gg ++++
  REBASE::M.PstRCH2I 290 MMHGIDEpHIDYQDTLSKSYD-EEAEYDIVLANPPFTGSIDKGDINENLQLSttktellFVENIYRLLKKGGTACVI 365
                         *****9835999999999999.888*****************99999986441111222444555555665665555 PP



Or compare REBASE::M.PstRCH2I to CDD or PaperBLAST