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Align REBASE::M.Rsp34AI to PF01170 (UPF0020)

REBASE::M.Rsp34AI has 484 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.2e-14   40.6   0.0    2.1e-14   39.8   0.0    1.3  1  REBASE::M.Rsp34AI  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Rsp34AI  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.0   2.1e-14   2.1e-14      19     134 ..     156     261 ..     153     266 .. 0.86

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 2.1e-14
                        HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE- CS
            UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqa 110
                        a+v++ + kp ++  DP CG+ ++l+ aa+   +  p++  + v+ +          + k+ g+D+ ++vv+ a  N+   g+++  ++++a
  REBASE::M.Rsp34AI 156 AMVEVVDPKPHQTVHDPACGTAGFLL-AAWEHMKKHPKARDRAVYSA---------LKNKFSGADIVPEVVRLAAMNLYLHGITGVESIVEA 237
                        9************************9.88888888874433333332.........234599****************************** PP

                        -GGG--STTS---EEEE------- CS
            UPF0020 111 daakLrlkegevdvivtnpPYGer 134
                        + a L +    +dv+++npP+G++
  REBASE::M.Rsp34AI 238 KDALLGAGGRTYDVVLANPPFGKK 261
                        ***99977779***********96 PP



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