REBASE::M.SbrCR22I has 463 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-10 27.5 0.0 4e-10 25.8 0.0 1.7 1 REBASE::M.SbrCR22I Domain annotation for each sequence (and alignments): >> REBASE::M.SbrCR22I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.8 0.0 4e-10 4e-10 19 174 .. 157 299 .. 154 312 .. 0.81 Alignments for each domain: == domain 1 score: 25.8 bits; conditional E-value: 4e-10 UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsq 109 alv++ + + ge +DP G+ ++l+ a+l ++++ g +l+l+g +l + v + a N+ ++ ++i+ ++ REBASE::M.SbrCR22I 157 ALVKVLKPTGGEAVYDPATGTAGFLVAAGLFARSMGSG-------------------DLRLVGNELVHDVQRMALMNLLLHELRGEITNVD 228 8999999**************************99954...................5579***************************999 PP UPF0020 110 adaakLrlkegevdvivtnpPYGe..rlgskkalekL...Ys....eflrelkrvlrgggrlvlltaenkalek 174 + r + vdvi+tnpP+G +l+s++++ +L +s +f + + l+++gr+++++++n +e+ REBASE::M.SbrCR22I 229 TLSQPPR--KPAVDVILTNPPFGLkgSLSSEQKK-QLdfpTSnkqlAFIQHCYKSLAKNGRAAIVVPDNVLFES 299 7777555..557***********73345444443.331121122226888888899999999999999998887 PP
Or compare REBASE::M.SbrCR22I to CDD or PaperBLAST