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Align REBASE::M.SbrCR22I to PF01170 (UPF0020)

REBASE::M.SbrCR22I has 463 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    1.8e-10   26.9   0.0    6.2e-10   25.2   0.0    1.8  1  REBASE::M.SbrCR22I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.SbrCR22I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   6.2e-10   6.2e-10      19     174 ..     157     299 ..     154     314 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 6.2e-10
                         HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE CS
             UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsq 109
                         alv++ + + ge  +DP  G+ ++l+ a+l ++++  g                   +l+l+g +l + v + a  N+   ++ ++i+ ++
  REBASE::M.SbrCR22I 157 ALVKVLKPTGGEAVYDPATGTAGFLVAAGLFARSMGSG-------------------DLRLVGNELVHDVQRMALMNLLLHELRGEITNVD 228
                         8999999**************************99955...................5579**************************9999 PP

                         --GGG--STTS---EEEE------..----HHHHHHH...HH....HHHHHHHHH-TT..-EEEEEESSHHHHH CS
             UPF0020 110 adaakLrlkegevdvivtnpPYGe..rlgskkalekL...Ys....eflrelkrvlrgggrlvlltsenkalek 174
                            +  r  +  vdvi+tnpP+G   +l+s++++ +L   +s    +f +   + l+++gr+++++++n  +e+
  REBASE::M.SbrCR22I 229 TLSQPPR--KPAVDVILTNPPFGLkgSLSSEQKK-QLdfpTSnkqlAFIQHCYKSLAKNGRAAIVVPDNVLFES 299
                         7777554..557***********73345444443.331121122226888888899999999999999988886 PP



Or compare REBASE::M.SbrCR22I to CDD or PaperBLAST