REBASE::M.Sen11997I has 544 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-11 30.8 0.1 1.6e-10 27.1 0.1 2.5 2 REBASE::M.Sen11997I Domain annotation for each sequence (and alignments): >> REBASE::M.Sen11997I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.2 0.0 0.038 0.038 65 91 .. 40 66 .. 10 86 .. 0.80 2 ! 27.1 0.1 1.6e-10 1.6e-10 20 140 .. 174 318 .. 168 334 .. 0.70 Alignments for each domain: == domain 1 score: -0.2 bits; conditional E-value: 0.038 UPF0020 65 lkaeaeeearaelklygsDldrrvvqg 91 ++++ e++ +++ +++g+D+++r q REBASE::M.Sen11997I 40 MLDTQEQRDEKRKQIAGIDFKPRFAQE 66 67777888889999*****99998775 PP == domain 2 score: 27.1 bits; conditional E-value: 1.6e-10 UPF0020 20 lvrlag..wkdgepllDPmCGsGtilI...Eaallganiapgllrefvye..............lkaeaeeearaelklygsDldrrvvq 90 +v++ + +ge++ DP CG+G++l E l + + + e ++ l+ ++++ ++ + g D+d +++ REBASE::M.Sen11997I 174 MVEMMEpnPARGETICDPACGTGGFLAtsyEYLLEKYSSLESIHTEIGTNergeleeqkiftgdLLMPWRNHV-DNNMFHGYDFDTTMLR 262 665554114579*************953335555555555444444444456656555555544333333322.33449*********** PP UPF0020 91 gareNaekagvgdl.iefsqadaakLr.....lkegevdvivtnpPYGerlgskka 140 a N+ gv+ i++++ +++ ++++ +++i++npP+ +l+++ REBASE::M.Sen11997I 263 IAAMNLIMHGVEAPdIHYQDTMSQSFSanfpqASKNAFNLILANPPFTGSLDEEDI 318 ***********97549999888887777776877889***********99998765 PP
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