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Align REBASE::M.Sen18747III to PF01170 (UPF0020)

REBASE::M.Sen18747III has 489 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
    5.8e-13   35.1   0.0    1.2e-12   34.0   0.0    1.5  1  REBASE::M.Sen18747III  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Sen18747III  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   1.2e-12   1.2e-12      18     134 ..     172     279 ..     168     344 .. 0.71

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.2e-12
                            HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGE CS
                UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdli 105
                            + +v++ + k ge+++DP CG+G++l  a   ++n ++           +++  ++  + ++ g+++++     + +N    g++  +
  REBASE::M.Sen18747III 172 RFMVERVDPKLGESIMDPACGTGGFLACAFDHVKNHYA-----------HTVTDHQILQKQIHGVEKKQLPHLLCTTNMLLHGIEVPV 248
                            679***********************877777777773...........233333445667*******99999999999999999999 PP

                            EEEE--G..GG--STTS---EEEE------- CS
                UPF0020 106 efsqada..akLrlkegevdvivtnpPYGer 134
                            +++  +   + L   ++++dvi+tnpP+G  
  REBASE::M.Sen18747III 249 QIRHDNTlnKPLSSWDEQMDVIITNPPFGGT 279
                            998866511456677779***********54 PP



Or compare REBASE::M.Sen18747III to CDD or PaperBLAST