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Align REBASE::M.Sen3387I to PF01170 (UPF0020)

REBASE::M.Sen3387I has 489 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    1.1e-12   34.2   0.0    2.1e-12   33.3   0.0    1.5  1  REBASE::M.Sen3387I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Sen3387I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.0   2.1e-12   2.1e-12      18     133 ..     172     278 ..     168     338 .. 0.79

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 2.1e-12
                         HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEE CS
             UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108
                         + +v++ + k ge+++DP CG+G++l  a   ++n ++           +++  ++  + ++ g+++++     + +N    g++  ++++
  REBASE::M.Sen3387I 172 RFMVERVDPKLGESIMDPACGTGGFLACAFDHVKNHYA-----------HTVTDHQILQKQIHGVEKKQLPHLLCTTNMLLHGIEVPVQIR 251
                         679***********************877777777773...........233333445667*******99999999999999999999998 PP

                         E--G..GG--STTS---EEEE------ CS
             UPF0020 109 qada..akLrlkegevdvivtnpPYGe 133
                           +   + L   ++++dvi+tnpP+G 
  REBASE::M.Sen3387I 252 HDNTlnKPLSSWDEQMDVIITNPPFGG 278
                         866511456677779**********95 PP



Or compare REBASE::M.Sen3387I to CDD or PaperBLAST