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Align REBASE::M.Sen64033II to PF01170 (UPF0020)

REBASE::M.Sen64033II has 489 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence             Description
    ------- ------ -----    ------- ------ -----   ---- --  --------             -----------
    5.8e-13   35.1   0.0    1.2e-12   34.0   0.0    1.5  1  REBASE::M.Sen64033II  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Sen64033II  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   1.2e-12   1.2e-12      18     134 ..     172     279 ..     168     344 .. 0.71

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.2e-12
                           HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEE CS
               UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlie 106
                           + +v++ + k ge+++DP CG+G++l  a   ++n ++           +++  ++  + ++ g+++++     + +N    g++  ++
  REBASE::M.Sen64033II 172 RFMVERVDPKLGESIMDPACGTGGFLACAFDHVKNHYA-----------HTVTDHQILQKQIHGVEKKQLPHLLCTTNMLLHGIEVPVQ 249
                           679***********************877777777773...........233333445667*******999999999999999999999 PP

                           EEE--G..GG--STTS---EEEE------- CS
               UPF0020 107 fsqada..akLrlkegevdvivtnpPYGer 134
                           ++  +   + L   ++++dvi+tnpP+G  
  REBASE::M.Sen64033II 250 IRHDNTlnKPLSSWDEQMDVIITNPPFGGT 279
                           98866511456677779***********54 PP



Or compare REBASE::M.Sen64033II to CDD or PaperBLAST