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Align REBASE::M.SenPU131II to PF01170 (UPF0020)

REBASE::M.SenPU131II has 512 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence             Description
    ------- ------ -----    ------- ------ -----   ---- --  --------             -----------
    1.3e-11   30.7   0.7    4.3e-10   25.7   0.2    2.8  2  REBASE::M.SenPU131II  


Domain annotation for each sequence (and alignments):
>> REBASE::M.SenPU131II  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.12      0.12     137     156 ..     159     178 ..     155     184 .. 0.77
   2 !   25.7   0.2   4.3e-10   4.3e-10      19     132 ..     193     298 ..     190     304 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.12
                           -HHHHHHHHHHHHHHHHHH- CS
               UPF0020 137 skkalekLYseflrelkrvl 156
                           + ++l +LY+ +lre+    
  REBASE::M.SenPU131II 159 EMHTLSRLYETMLREMRDAA 178
                           5677899********98755 PP

  == domain 2  score: 25.7 bits;  conditional E-value: 4.3e-10
                           HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHH.HH--EEEEES-HHHHHHHHHHHHHTT-GG.GE CS
               UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeear.aelklygsDldrrvvqgareNaekagvgd.li 105
                            +v++ + + ge+ lDP CG+G++l+Ea    ++              +++e ++  +e +++g + ++      + N+   g++  +i
  REBASE::M.SenPU131II 193 FMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQC------------KTVEDREVlQESSIFGGEAKSLPYLLVQMNLLLHGLEYpRI 269
                           599999*********************976666666............4566666667788*****99999999999999999986368 PP

                           EEEE--GGG--..STTS---EEEE----- CS
               UPF0020 106 efsqadaakLr..lkegevdvivtnpPYG 132
                           + ++     Lr   +++ vdvi+tnpP+G
  REBASE::M.SenPU131II 270 DPENSLRFPLRemGDKDRVDVILTNPPFG 298
                           888888888886656679**********9 PP



Or compare REBASE::M.SenPU131II to CDD or PaperBLAST