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Align REBASE::M.SenPU131III to PF01170 (UPF0020)

REBASE::M.SenPU131III has 489 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
    4.4e-13   35.5   0.0    9.1e-13   34.5   0.0    1.5  1  REBASE::M.SenPU131III  


Domain annotation for each sequence (and alignments):
>> REBASE::M.SenPU131III  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.0   9.1e-13   9.1e-13      18     134 ..     172     279 ..     168     344 .. 0.72

  Alignments for each domain:
  == domain 1  score: 34.5 bits;  conditional E-value: 9.1e-13
                            HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGE CS
                UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdli 105
                            + +v + + k ge+++DP CG+G++l  a   ++n ++           +++  ++  ++++ g+++++     + +N    g++  +
  REBASE::M.SenPU131III 172 RFMVDRVDPKLGESIMDPACGTGGFLACAFDHVKNHYA-----------HTVADRQILQQQIHGVEKKQLPHLLCTTNMLLHGIEVPV 248
                            67999*********************877777777773...........344444447778*******99999999999999999999 PP

                            EEEE--G..GG--STTS---EEEE------- CS
                UPF0020 106 efsqada..akLrlkegevdvivtnpPYGer 134
                            +++  +   + L   ++++dvi+tnpP+G  
  REBASE::M.SenPU131III 249 QIRHDNTlnKPLSSWDEQMDVIITNPPFGGT 279
                            998866511456677779***********54 PP



Or compare REBASE::M.SenPU131III to CDD or PaperBLAST