REBASE::M.SenPU131III has 489 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3e-13 36.0 0.0 6.1e-13 35.0 0.0 1.5 1 REBASE::M.SenPU131III Domain annotation for each sequence (and alignments): >> REBASE::M.SenPU131III # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.0 0.0 6.1e-13 6.1e-13 18 134 .. 172 279 .. 168 344 .. 0.72 Alignments for each domain: == domain 1 score: 35.0 bits; conditional E-value: 6.1e-13 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdli 105 + +v + + k ge+++DP CG+G++l a ++n ++ +++ ++ ++++ g+++++ + +N g++ + REBASE::M.SenPU131III 172 RFMVDRVDPKLGESIMDPACGTGGFLACAFDHVKNHYA-----------HTVADRQILQQQIHGVEKKQLPHLLCTTNMLLHGIEVPV 248 67999*********************877777777773...........344444447778*******99999999999999999999 PP UPF0020 106 efsqada..akLrlkegevdvivtnpPYGer 134 +++ + + L ++++dvi+tnpP+G REBASE::M.SenPU131III 249 QIRHDNTlnKPLSSWDEQMDVIITNPPFGGT 279 998866511456677779***********64 PP
Or compare REBASE::M.SenPU131III to CDD or PaperBLAST