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Align REBASE::M.Sgl8271II to PF01170 (UPF0020)

REBASE::M.Sgl8271II has 701 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
    1.3e-10   27.4   0.0    3.8e-10   25.9   0.0    1.6  1  REBASE::M.Sgl8271II  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Sgl8271II  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   3.8e-10   3.8e-10      31     134 ..     237     340 ..     232     349 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 3.8e-10
                          -EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHH.HH--EEEEES-HHHHHHHHHHHHHTT....-GGGEEEEE--GGG- CS
              UPF0020  31 pllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeear.aelklygsDldrrvvqgareNaekag....vgdliefsqadaakL 115
                          ++lDP CGsG +l+   l  ++   ++        +   e+e+   e  ++g+D+d+ +v  +r N+   +    v + +++++ +a + 
  REBASE::M.Sgl8271II 237 RILDPCCGSGNFLLTVFLALKSNLVQKG-------LPPGEAEKLlLEECIFGFDIDSTAVWLCRVNLLLLCdtdfVPGNWHIQCDNALMG 319
                          79***********988776555552333.......22222222223344*****************987763333677889999888877 PP

                          -..STTS---EEEE------- CS
              UPF0020 116 r..lkegevdvivtnpPYGer 134
                          +  + +g++d+i++npP+G  
  REBASE::M.Sgl8271II 320 HskKISGKFDLIIGNPPWGSD 340
                          7766678************75 PP



Or compare REBASE::M.Sgl8271II to CDD or PaperBLAST