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Align REBASE::M.SliSII to PF01170 (UPF0020)

REBASE::M.SliSII has 523 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    4.6e-11   28.9   0.0    9.9e-11   27.8   0.0    1.5  1  REBASE::M.SliSII  


Domain annotation for each sequence (and alignments):
>> REBASE::M.SliSII  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   9.9e-11   9.9e-11      31     132 ..     192     277 ..     183     288 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 9.9e-11
                       -EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS--- CS
           UPF0020  31 pllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevd 123
                       ++lDP CGsG++ +  a  ++n                  ++   e+++yg ++ ++ v+ ++ N+   g+++ i + +    ++++  g +d
  REBASE::M.SliSII 192 RILDPACGSGGMFVQSARFVQNHK----------------KNPSSEISIYGQEKVAETVRLCKMNLAVHGLSGDIRQANTYYENVHNCIGRFD 268
                       79****************999999................44559999**************************************9999*** PP

                       EEEE----- CS
           UPF0020 124 vivtnpPYG 132
                        + +npP+ 
  REBASE::M.SliSII 269 FVMANPPFN 277
                       *******95 PP



Or compare REBASE::M.SliSII to CDD or PaperBLAST