REBASE::M.SwoAI has 493 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-14 39.6 0.0 6.1e-14 38.3 0.0 1.6 1 REBASE::M.SwoAI
Domain annotation for each sequence (and alignments):
>> REBASE::M.SwoAI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 38.3 0.0 6.1e-14 6.1e-14 18 134 .. 172 279 .. 168 343 .. 0.71
Alignments for each domain:
== domain 1 score: 38.3 bits; conditional E-value: 6.1e-14
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqad 111
+v +++ k ge+++DP CG+G++l a +++ + + + e ++ +++++g+++++ + +N g++ ++++ +
REBASE::M.SwoAI 172 KFIVAVTDPKLGESIMDPACGTGGFLACAFDHVKTNY---V--------KSGEDHKTLQQQIFGVEKKQLPHLLCTTNMMLHGIEVPVQIKHGN 254
568999********************55444443333...1........233334446677********9999999999999999999999988 PP
UPF0020 112 aakLr..lkegevdvivtnpPYGer 134
+ + +++vdvi+tnpP+G
REBASE::M.SwoAI 255 TLNKPlsSWDDQVDVIITNPPFGGT 279
765443377789***********54 PP
Or compare REBASE::M.SwoAI to CDD or PaperBLAST