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Align REBASE::M.SwoAI to PF01170 (UPF0020)

REBASE::M.SwoAI has 493 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-14   39.1   0.0    8.8e-14   37.8   0.0    1.7  1  REBASE::M.SwoAI  


Domain annotation for each sequence (and alignments):
>> REBASE::M.SwoAI  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   8.8e-14   8.8e-14      18     134 ..     172     279 ..     168     343 .. 0.71

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 8.8e-14
                      HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE-- CS
          UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqad 111
                        +v +++ k ge+++DP CG+G++l  a   +++ +   +        +  e ++  +++++g+++++     + +N    g++  ++++  +
  REBASE::M.SwoAI 172 KFIVAVTDPKLGESIMDPACGTGGFLACAFDHVKTNY---V--------KSGEDHKTLQQQIFGVEKKQLPHLLCTTNMMLHGIEVPVQIKHGN 254
                      568999*******************955444433333...1........223334446667********9999999999999999999999988 PP

                      GGG--..STTS---EEEE------- CS
          UPF0020 112 aakLr..lkegevdvivtnpPYGer 134
                        + +    +++vdvi+tnpP+G  
  REBASE::M.SwoAI 255 TLNKPlsSWDDQVDVIITNPPFGGT 279
                      765443377789***********54 PP



Or compare REBASE::M.SwoAI to CDD or PaperBLAST