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Align REBASE::M.Van425I to PF01170 (UPF0020)

REBASE::M.Van425I has 519 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.1e-12   34.1   0.0    2.5e-12   33.0   0.0    1.5  1  REBASE::M.Van425I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Van425I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   2.5e-12   2.5e-12      18     135 ..     163     298 ..     159     306 .. 0.78

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 2.5e-12
                        HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SS...........HHHHHHHHHH...HH--EEEEES-HHHHHHHHHH CS
            UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvle...........lkaeaeeear...aelklygsDldrrvvqgareN 95 
                         a++   + +p +++lDP CG+G++ + a+   ++   + + + +++           +k+++++++    ++  ++g ++ ++  + +  N
  REBASE::M.Van425I 163 DAMLACVRPEPKKTILDPACGTGGFFLSACDWITYGDTQWIEKGMSHwnpakdnsstiAKSKLNKDQVkflRDNTFFGNEIVPSTRRMCLMN 254
                        5999999***********************9888888666666666699999**999966666666665557777***************99 PP

                        HHHTT-G...GGEEEEE--G..GG--STTS---EEEE-------- CS
            UPF0020  96 aekagvg...dliefsqada..akLrlkegevdvivtnpPYGerl 135
                        +   ++g   ++ +++ ada  + L+  e++vd +++npP+G++ 
  REBASE::M.Van425I 255 LFLHNIGsidGEPKVERADAllTPLK-GEDKVDYVLANPPFGKKS 298
                        86665541114555555555116666.899************975 PP



Or compare REBASE::M.Van425I to CDD or PaperBLAST