REBASE::M.VmeT6III has 525 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.4e-13 35.5 0.0 1e-12 34.3 0.0 1.6 1 REBASE::M.VmeT6III Domain annotation for each sequence (and alignments): >> REBASE::M.VmeT6III # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.3 0.0 1e-12 1e-12 17 138 .. 168 318 .. 164 373 .. 0.84 Alignments for each domain: == domain 1 score: 34.3 bits; conditional E-value: 1e-12 UPF0020 17 AaalvrlagwkdgepllDPmCGsGtil...IEaallganiapgllrefvye.......................lkaeaeeear.aelkly 80 +a++++ +++++++ DP CG+G++l E l + + + g +e+++ l +++ + +e + REBASE::M.VmeT6III 168 IRAMIEMLDVEETHRVCDPACGTGGFLsstYEYLLEKYSSPEGVEKEQAFDtegkpvldvhgnpvfnylyagdlLSNRW----HiDEDMFH 254 58************************85545888888888888888888889*************99876444333333....3345569* PP UPF0020 81 gsDldrrvvqgareNaekagvgdl.iefsqadaakLr.....lkegevdvivtnpPYGerlgsk 138 g+D+d+ +++ a N+ gv++ i++++ +++ ++++ +d+i++npP+ +l+++ REBASE::M.VmeT6III 255 GFDFDSTMLRVAAMNLVMHGVKQPdIHYQDTLSQSFIerfpdEAKNGFDIILANPPFKGSLDEE 318 ********************998549999888877655666877889**********9999876 PP
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