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Align REBASE::M.Vvu36I to PF01170 (UPF0020)

REBASE::M.Vvu36I has 496 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    1.1e-10   27.6   0.0    2.8e-10   26.3   0.0    1.7  1  REBASE::M.Vvu36I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Vvu36I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   2.8e-10   2.8e-10      18     133 ..     172     278 ..     168     344 .. 0.76

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 2.8e-10
                       HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE- CS
           UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqa 110
                       + +v++ + k ge+++DP CG+G++l   a    ++    +        + a  ++  + ++ g+++++     + +N    g++  ++++  
  REBASE::M.Vvu36I 172 RFIVNRLDPKLGEQIMDPACGTGGFL---ACSFDHVKENYV--------TSAADHQTLQKQIHGVEKKQLPHLLCITNMMLHGIEVPVQIKHG 253
                       56899999*****************9...555666662222........233333335556********99999*****99999999999998 PP

                       -GGG--..STTS---EEEE------ CS
           UPF0020 111 daakLr..lkegevdvivtnpPYGe 133
                       +  + +  + +++++vi+tnpP+G 
  REBASE::M.Vvu36I 254 NTLNKPlsNWDSNINVIATNPPFGG 278
                       87665533666799**********5 PP



Or compare REBASE::M.Vvu36I to CDD or PaperBLAST