REBASE::M.Vvu36I has 496 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.1e-11 28.1 0.0 1.9e-10 26.8 0.0 1.7 1 REBASE::M.Vvu36I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Vvu36I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.8 0.0 1.9e-10 1.9e-10 18 134 .. 172 279 .. 168 344 .. 0.75
Alignments for each domain:
== domain 1 score: 26.8 bits; conditional E-value: 1.9e-10
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqa 110
+ +v++ + k ge+++DP CG+G++l a + ++ + + a ++ + ++ g+++++ + +N g++ ++++
REBASE::M.Vvu36I 172 RFIVNRLDPKLGEQIMDPACGTGGFL---ACSFDHVKENYV--------TSAADHQTLQKQIHGVEKKQLPHLLCITNMMLHGIEVPVQIKHG 253
56899999*****************9...555666662222........233333335556********99999******9999999999998 PP
UPF0020 111 daakLr..lkegevdvivtnpPYGer 134
+ + + + +++++vi+tnpP+G
REBASE::M.Vvu36I 254 NTLNKPlsNWDSNINVIATNPPFGGT 279
87665533666799**********54 PP
Or compare REBASE::M.Vvu36I to CDD or PaperBLAST