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Align REBASE::M.Xax8raI to PF01170 (UPF0020)

REBASE::M.Xax8raI has 489 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    3.3e-10   26.1   0.0    6.9e-10   25.1   0.0    1.4  1  REBASE::M.Xax8raI  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Xax8raI  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   6.9e-10   6.9e-10      20     132 ..     174     279 ..     170     289 .. 0.79

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 6.9e-10
                        HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT..-GGGEEEEE CS
            UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekag..vgdliefsq 109
                        +vr+ + k  e+ +DP CG+G++l  a   +++++            ++ae ea  +++++g+++++     a +N    g  v  +i+  +
  REBASE::M.Xax8raI 174 MVRMVDPKLHEKVMDPACGTGGFLTCAIEHKRQRY-----------VRTAEDEAILQASIFGVEKKPLPHLLATTNMVLHGieVPSQIKHDN 254
                        9***********************88777777777...........4677888888999******986666666666555500556666677 PP

                        --GGG--..STTS---EEEE----- CS
            UPF0020 110 adaakLr..lkegevdvivtnpPYG 132
                          a+ L    + + v+ iv+npP+G
  REBASE::M.Xax8raI 255 TLARPLInwGPGERVECIVANPPFG 279
                        77777777766679**********9 PP



Or compare REBASE::M.Xax8raI to CDD or PaperBLAST