REBASE::M.XmnI has 620 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-11 30.8 0.0 1.6e-10 27.1 0.0 2.5 1 REBASE::M.XmnI Domain annotation for each sequence (and alignments): >> REBASE::M.XmnI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.1 0.0 1.6e-10 1.6e-10 31 141 .. 144 242 .. 133 270 .. 0.77 Alignments for each domain: == domain 1 score: 27.1 bits; conditional E-value: 1.6e-10 UPF0020 31 pllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaek........agvgdliefsqadaakLrl 117 + lDP CGsGt+lIE +++ + ++++++g+D+++r++ ++ N+ + a ++ l+e + + REBASE::M.XmnI 144 KCLDPACGSGTFLIEVIKKWRKE-------------------NAQKISVWGADKNPRMLLIGELNLGHfpgltfnrALMDSLVEPGKRHSKPWC- 218 569************65555554...................457889*****************97522222222566666777666666665. PP UPF0020 118 kegevdvivtnpPYGerlgskkal 141 + g +d i+tnpP+G +++ +a REBASE::M.XmnI 219 RYGYFDFILTNPPFGVTVEASGAA 242 8889***********999988775 PP
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