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Align REBASE::M.Xor7341II to PF01170 (UPF0020)

REBASE::M.Xor7341II has 489 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
    3.1e-11   29.4   0.0    6.2e-11   28.5   0.0    1.4  1  REBASE::M.Xor7341II  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Xor7341II  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   6.2e-11   6.2e-11      20     132 ..     174     279 ..     170     289 .. 0.80

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 6.2e-11
                          HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHH..TT-GGGEEE CS
              UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaek..agvgdlief 107
                          +vr+ + k  e+ +DP CG+G++l  a   +++++            ++ae ea  +++++g+++++     a +N      +v  +i+ 
  REBASE::M.Xor7341II 174 MVRMVDPKLHEKVMDPACGTGGFLTCAIEHKRQRY-----------VRTAEDEAVLQASIFGVEKKPLPHLLATTNMVLhgIEVPSQIKH 252
                          9***********************88777777777...........5788999999999******9866666666655500555566666 PP

                          EE--GGG--..STTS---EEEE----- CS
              UPF0020 108 sqadaakLr..lkegevdvivtnpPYG 132
                           +  a+ L    + + vd iv+npP+G
  REBASE::M.Xor7341II 253 DNTLARPLIswGPGERVDCIVANPPFG 279
                          7777788878766779**********9 PP



Or compare REBASE::M.Xor7341II to CDD or PaperBLAST