REBASE::M1.AgoG2I has 381 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-12 33.5 0.1 2e-09 23.6 0.0 2.6 3 REBASE::M1.AgoG2I
Domain annotation for each sequence (and alignments):
>> REBASE::M1.AgoG2I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.6 0.0 2e-09 2e-09 27 53 .. 48 74 .. 30 108 .. 0.88
2 ! 7.1 0.1 0.00022 0.00022 106 133 .. 222 250 .. 216 255 .. 0.80
3 ? -3.3 0.0 0.35 0.35 148 170 .. 300 321 .. 293 327 .. 0.77
Alignments for each domain:
== domain 1 score: 23.6 bits; conditional E-value: 2e-09
UPF0020 27 kdgepllDPmCGsGtilIEaallgani 53
kd+ ++lDP+CGsGt l+Ea l +
REBASE::M1.AgoG2I 48 KDNYVILDPFCGSGTTLVEASLRNLSS 74
67889***************9976655 PP
== domain 2 score: 7.1 bits; conditional E-value: 0.00022
UPF0020 106 efsqadaakLr.lkegevdvivtnpPYGe 133
++ + da++L +++++d+i+t pPY +
REBASE::M1.AgoG2I 222 KIISNDARSLIdIQSESIDMIITSPPYAN 250
5666788888876677***********75 PP
== domain 3 score: -3.3 bits; conditional E-value: 0.35
UPF0020 148 flrelkrvlrgggrlvlltaenk 170
+l+e+ rv+++ rl++++ +++
REBASE::M1.AgoG2I 300 VLQEMYRVMKN-DRLCFIVIGDS 321
68899999988.88888877665 PP
Or compare REBASE::M1.AgoG2I to CDD or PaperBLAST