REBASE::M1.BceNI has 485 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-10 27.7 0.0 5.5e-10 25.4 0.0 2.1 1 REBASE::M1.BceNI
Domain annotation for each sequence (and alignments):
>> REBASE::M1.BceNI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.4 0.0 5.5e-10 5.5e-10 20 132 .. 175 274 .. 169 286 .. 0.81
Alignments for each domain:
== domain 1 score: 25.4 bits; conditional E-value: 5.5e-10
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqada 112
+ +l + +++e+++DP CG+G++l+Ea ++ + ++lklyg +++ ar N+ g++d+ +++
REBASE::M1.BceNI 175 MTMLLDPEENESIYDPACGTGGMLLEAVDHLNDTS-----------------RDARTLKLYGQEKNLTTSSIARMNLFLHGLEDFKIVRNDTL 250
889999*********************88777777.................4457899***********************99876666433 PP
UPF0020 113 akLr....lkeg.evdvivtnpPYG 132
++ + +++ +d +++npP+
REBASE::M1.BceNI 251 KN-PayfeEDKLmTFDCVIANPPFS 274
33.235534443589********95 PP
Or compare REBASE::M1.BceNI to CDD or PaperBLAST