REBASE::M1.DbaKI has 505 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-10 27.5 0.0 5.1e-10 25.5 0.0 2.0 1 REBASE::M1.DbaKI
Domain annotation for each sequence (and alignments):
>> REBASE::M1.DbaKI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.5 0.0 5.1e-10 5.1e-10 19 131 .. 191 292 .. 186 296 .. 0.83
Alignments for each domain:
== domain 1 score: 25.5 bits; conditional E-value: 5.1e-10
UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareNaekagvgdliefsqa 110
+vr+ k+ge+++DP CG+G++l+Ea +++ +++ klyg +++ ar N+ g +d+ +++
REBASE::M1.DbaKI 191 LMVRILAPKAGETIYDPACGTGGMLLEALHHVKEHG----------------GDENlMLGKLYGQEKNLTTSSIARMNLFLHGAEDF-HIERG 266
5999999********************976666665................2344366679********99******999999885.89999 PP
UPF0020 111 daakLr.....lkegevdvivtnpPY 131
d L+ + + +d +++npP+
REBASE::M1.DbaKI 267 DTLRLPafysgDSLATFDCVIANPPF 292
99999988765444589999***998 PP
Or compare REBASE::M1.DbaKI to CDD or PaperBLAST