REBASE::M1.Sgr13350III has 407 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.1e-12 31.5 0.0 2.2e-09 23.4 0.0 2.9 3 REBASE::M1.Sgr13350III Domain annotation for each sequence (and alignments): >> REBASE::M1.Sgr13350III # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.4 0.0 2.2e-09 2.2e-09 7 65 .. 70 136 .. 66 177 .. 0.68 2 ! 4.4 0.0 0.0015 0.0015 108 133 .. 265 292 .. 261 301 .. 0.79 3 ? -1.3 0.0 0.079 0.079 139 163 .. 325 349 .. 319 355 .. 0.76 Alignments for each domain: == domain 1 score: 23.4 bits; conditional E-value: 2.2e-09 UPF0020 7 ngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye..........l 65 ++++ k+++A lv+ + g + lDP+ G Gt++ Eaallg++++ + + REBASE::M1.Sgr13350III 70 SYQGKFKPAMAHWLVKSFSPE-GGRVLDPLGGVGTVPFEAALLGRRAITNDKSPLA-AtvgaakmtppT 136 678999999999999987765.66789*******************9943333322.135666665552 PP == domain 2 score: 4.4 bits; conditional E-value: 0.0015 UPF0020 108 sqadaakLr.lkegevdvivtnpPY.Ge 133 d+++L+ + + vd+i+t pP+ G REBASE::M1.Sgr13350III 265 HHGDFRELPdKIADPVDAIITSPPFiGM 292 678999999766679*********9555 PP == domain 3 score: -1.3 bits; conditional E-value: 0.079 UPF0020 139 kalekLYseflrelkrvlrgggrlv 163 + + Ysef ++ +vl+ gg ++ REBASE::M1.Sgr13350III 325 TKSTAVYSEFFSTCTQVLAPGGVMA 349 344889*************977654 PP
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