REBASE::M1.SmoLVII has 249 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.4e-13 35.2 0.0 2.9e-12 32.8 0.0 2.0 1 REBASE::M1.SmoLVII Domain annotation for each sequence (and alignments): >> REBASE::M1.SmoLVII # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.8 0.0 2.9e-12 2.9e-12 27 158 .. 55 168 .. 49 201 .. 0.84 Alignments for each domain: == domain 1 score: 32.8 bits; conditional E-value: 2.9e-12 UPF0020 27 kdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgare..NaekagvgdliefsqadaakL 115 k+++ lD + G+Gt l+Ea ll ++i+ g+D+++ ++++re N e+ g ++++ + + da++L REBASE::M1.SmoLVII 55 KENDLVLDQFAGGGTTLVEAKLLNRDII--------------------------GVDINEVSLERCREkvNFEHEGSNGKVYIHKGDARNL 119 67788999******************99..........................************8644889****************** PP UPF0020 116 r.lkegevdvivtnpPYGerlgskkal.ekLY....seflrelkrvlrg 158 +++++d i t pPY + ++ ++ e+L ++fl+e+k+v + REBASE::M1.SmoLVII 120 DfISDESIDFICTHPPYANIIQYSDNIeEDLShlkiPQFLEEMKKVAFE 168 *98888**************99988886777522235788888876544 PP
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