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Align REBASE::M1.SmoLVII to PF01170 (UPF0020)

REBASE::M1.SmoLVII has 249 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    8.3e-13   34.6   0.0    5.7e-12   31.8   0.0    2.0  1  REBASE::M1.SmoLVII  


Domain annotation for each sequence (and alignments):
>> REBASE::M1.SmoLVII  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0   5.7e-12   5.7e-12      27     157 ..      55     167 ..      49     195 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 5.7e-12
                         -TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHH..HHHHTT-GGGEEEEE--GGG- CS
             UPF0020  27 kpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgare..NaekagvgdliefsqadaakL 115
                         k+++  lD + G+Gt l+Ea ll ++i+                          g+D+++  ++++re  N e+ g ++++ + + da++L
  REBASE::M1.SmoLVII  55 KENDLVLDQFAGGGTTLVEAKLLNRDII--------------------------GVDINEVSLERCREkvNFEHEGSNGKVYIHKGDARNL 119
                         677888999****************999..........................************8644889****************** PP

                         -.STTS---EEEE----------HHHH.HHHH....HHHHHHHHHH-T CS
             UPF0020 116 r.lkegevdvivtnpPYGerlgskkal.ekLY....seflrelkrvlr 157
                            +++++d i t pPY + ++   ++ e+L     ++fl+e+k+v  
  REBASE::M1.SmoLVII 120 DfISDESIDFICTHPPYANIIQYSDNIeEDLShlkiPQFLEEMKKVAF 167
                         *98888**************9998888677752223578888887654 PP



Or compare REBASE::M1.SmoLVII to CDD or PaperBLAST