REBASE::M2.Asu14238II has 488 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-11 29.8 0.0 1.6e-10 27.1 0.0 2.4 1 REBASE::M2.Asu14238II
Domain annotation for each sequence (and alignments):
>> REBASE::M2.Asu14238II
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 27.1 0.0 1.6e-10 1.6e-10 18 139 .. 178 286 .. 172 354 .. 0.86
Alignments for each domain:
== domain 1 score: 27.1 bits; conditional E-value: 1.6e-10
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdli 105
+ ++ + ++ge+ +DP CGsG++l+ al ++ ++ ++lklyg +++ + ar N g++++
REBASE::M2.Asu14238II 178 KLMTMIMDPQPGESVYDPTCGSGGLLLNCALHLKEEG-----------------KEYRTLKLYGQEINLITSAIARMNMFMHGIEEFS 248
5689999***********************9988887.................4558999***********************9975 PP
UPF0020 106 efsq.adaak..Lr.lkegevdvivtnpPYGerlgskk 139
++ a+ L+ + + ++vi++npPY ++ ++k
REBASE::M2.Asu14238II 249 IVRGdTLARPafLHnDQLKTFNVILANPPYSIKAWDQK 286
555413332222665333489*********98776665 PP
Or compare REBASE::M2.Asu14238II to CDD or PaperBLAST