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Align REBASE::M2.Bth426III to PF01170 (UPF0020)

REBASE::M2.Bth426III has 543 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence             Description
    ------- ------ -----    ------- ------ -----   ---- --  --------             -----------
    1.1e-10   27.6   0.0    5.9e-10   25.3   0.0    2.2  1  REBASE::M2.Bth426III  


Domain annotation for each sequence (and alignments):
>> REBASE::M2.Bth426III  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   5.9e-10   5.9e-10      19     133 ..     221     322 ..     214     328 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 5.9e-10
                           HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEE CS
               UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlief 107
                            + +l   + ge+++DP CG+G++lI  al + ++  g +                ++lklyg + +      ar N+   gv+d+  +
  REBASE::M2.Bth426III 221 LMTQLLAPQGGESIYDPTCGTGGMLIS-ALDEVKRSGGEY----------------RTLKLYGQERNLITSSIARMNLFLHGVEDFEII 292
                           578888899*****************6.566666765555................7899*************************9888 PP

                           EE...--GGG--.STTS---EEEE------ CS
               UPF0020 108 sq...adaakLr.lkegevdvivtnpPYGe 133
                           +    ad ++++  +  ++dvi++npPY +
  REBASE::M2.Bth426III 293 RGdtlADPKHIEgDRLRQFDVILANPPYSI 322
                           751224555566744448**********75 PP



Or compare REBASE::M2.Bth426III to CDD or PaperBLAST